Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Snord35b-201ENSMUST00000082833 87 ntBASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Mir21a-201ENSMUST00000083521 92 ntBASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Gm25859-201ENSMUST00000083710 91 ntBASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trav13d-3J3QMG8 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm25420-201ENSMUST00000104216 127 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm14804-201ENSMUST00000122322 508 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm22320-201ENSMUST00000157149 312 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm23671-201ENSMUST00000157472 103 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm24061-201ENSMUST00000157489 120 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm24998-201ENSMUST00000157908 89 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm25817-201ENSMUST00000177758 121 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm24766-201ENSMUST00000179182 121 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm18964-201ENSMUST00000193013 563 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm39147-201ENSMUST00000211376 465 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.01□□□□□ -1.93
Trav13d-3J3QMG8 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm14442-201ENSMUST00000119690 1736 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm16354-201ENSMUST00000155376 150 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm22755-201ENSMUST00000157143 100 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm24505-201ENSMUST00000157682 126 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm24532-201ENSMUST00000157951 286 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm25163-201ENSMUST00000158905 104 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm23053-201ENSMUST00000175136 96 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm25361-201ENSMUST00000179358 76 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm11395-201ENSMUST00000181011 499 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm28151-201ENSMUST00000189404 951 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm32340-201ENSMUST00000192883 259 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm6510-201ENSMUST00000195916 574 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm43115-201ENSMUST00000196244 160 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm9379-201ENSMUST00000196790 646 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm43227-201ENSMUST00000202239 677 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm19032-201ENSMUST00000208584 592 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 AC140785.1-201ENSMUST00000217782 383 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm19786-201ENSMUST00000222589 580 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 AC154276.2-201ENSMUST00000227707 309 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm23736-201ENSMUST00000082553 75 ntBASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trav13d-3J3QMG8 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm14579-201ENSMUST00000117068 283 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm15142-201ENSMUST00000121013 856 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm11582-201ENSMUST00000121041 236 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm22957-201ENSMUST00000122511 123 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm22277-201ENSMUST00000157204 277 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm25283-201ENSMUST00000157272 77 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm17186-201ENSMUST00000171742 456 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm22108-201ENSMUST00000177961 106 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Spin2g-201ENSMUST00000178425 687 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm24798-201ENSMUST00000179334 106 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm29413-201ENSMUST00000186019 880 ntBASIC2.99□□□□□ -1.93
Trav13d-3J3QMG8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms