Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm23626-201ENSMUST00000082458 133 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Snord15b-201ENSMUST00000083032 145 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm24031-201ENSMUST00000083930 131 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Pcdh1F7BJK1 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm23653-201ENSMUST00000116751 97 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm5353-201ENSMUST00000139800 793 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm25923-201ENSMUST00000158312 138 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm25606-201ENSMUST00000158363 95 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm24862-201ENSMUST00000179103 79 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm23310-201ENSMUST00000179105 79 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm25461-201ENSMUST00000179293 79 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm27608-201ENSMUST00000184822 162 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm29147-201ENSMUST00000186846 315 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm29227-201ENSMUST00000187139 315 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm29034-201ENSMUST00000188099 315 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm28744-201ENSMUST00000189939 340 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm28160-201ENSMUST00000191229 315 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm37129-201ENSMUST00000195791 315 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm43586-201ENSMUST00000195948 310 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm18453-201ENSMUST00000208000 626 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm8940-201ENSMUST00000212585 219 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Pcdh1F7BJK1 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Pcdh1F7BJK1 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Pcdh1F7BJK1 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
Pcdh1F7BJK1 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm24578-201ENSMUST00000103970 129 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm14825-201ENSMUST00000113538 701 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm15553-201ENSMUST00000118757 430 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm14067-201ENSMUST00000119340 314 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm5379-201ENSMUST00000120973 826 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm14559-201ENSMUST00000121745 496 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm5958-201ENSMUST00000147698 297 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm23743-201ENSMUST00000157389 274 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm25956-201ENSMUST00000175115 217 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm26501-201ENSMUST00000178307 107 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm27747-201ENSMUST00000184707 85 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm42925-201ENSMUST00000197359 285 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm32308-201ENSMUST00000203053 280 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm35931-201ENSMUST00000203931 448 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm20039-201ENSMUST00000210329 394 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm45327-201ENSMUST00000211612 565 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm46190-201ENSMUST00000219650 427 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm22974-201ENSMUST00000083301 103 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm23845-201ENSMUST00000083834 152 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Pcdh1F7BJK1 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms