Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm43486-201ENSMUST00000196431 4339 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Gm7123-201ENSMUST00000117647 213 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Gm44903-201ENSMUST00000206840 130 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Gm5471-201ENSMUST00000072732 337 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Gm16533-201ENSMUST00000140035 228 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Gm25715-201ENSMUST00000158627 125 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 AC156559.1-201ENSMUST00000224158 222 ntBASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col6a3E9PWQ3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Gm6985-201ENSMUST00000121255 271 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Gm15235-201ENSMUST00000200572 194 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 AC124729.1-202ENSMUST00000225587 938 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Gm23435-201ENSMUST00000157183 156 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Mir7663-201ENSMUST00000183950 61 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Mir196b-201ENSMUST00000083509 85 ntBASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col6a3E9PWQ3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Gm38217-201ENSMUST00000194358 910 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Gm43680-201ENSMUST00000199466 340 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Gm6030-201ENSMUST00000078768 402 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Gm44624-201ENSMUST00000208700 2278 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Gm7209-201ENSMUST00000122339 333 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Col6a3E9PWQ3 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Gm20542-201ENSMUST00000174582 372 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Gm35931-201ENSMUST00000203931 448 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Gm14469-201ENSMUST00000118363 202 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Gm23120-201ENSMUST00000157654 287 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Gm43659-201ENSMUST00000200894 628 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.72□□□□□ -2.13
Col6a3E9PWQ3 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm14065-201ENSMUST00000120848 585 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm27921-201ENSMUST00000183968 108 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm26126-201ENSMUST00000083188 164 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm12386-201ENSMUST00000117380 688 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm24857-201ENSMUST00000158061 310 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 AC154329.2-201ENSMUST00000225257 383 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm17062-201ENSMUST00000166987 461 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 AC158631.1-201ENSMUST00000219202 138 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 AC159263.3-201ENSMUST00000223434 460 ntBASIC1.71□□□□□ -2.14
Col6a3E9PWQ3 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm22214-201ENSMUST00000157563 172 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm24900-201ENSMUST00000158128 134 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm27527-201ENSMUST00000183903 99 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Mir6540-201ENSMUST00000184886 108 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm7065-201ENSMUST00000222150 474 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm23517-201ENSMUST00000082830 192 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm25124-201ENSMUST00000083345 164 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.7□□□□□ -2.14
Col6a3E9PWQ3 Gm14867-201ENSMUST00000120156 866 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms