Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm14861-201ENSMUST00000119451 455 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm15428-201ENSMUST00000121352 333 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm25826-201ENSMUST00000157090 137 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm22215-201ENSMUST00000157558 96 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm25494-201ENSMUST00000158143 100 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm24726-201ENSMUST00000158232 121 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm29574-201ENSMUST00000186226 696 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm37693-201ENSMUST00000194562 234 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm43649-201ENSMUST00000196596 391 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gm6125-201ENSMUST00000217983 3472 ntBASIC4.96□□□□□ -1.62
Nubp1Q9R060 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Nubp1Q9R060 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm24578-201ENSMUST00000103970 129 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm23319-201ENSMUST00000104467 131 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm13432-201ENSMUST00000118861 241 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm12304-201ENSMUST00000120312 385 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm11448-201ENSMUST00000120427 450 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Mir1942-201ENSMUST00000157274 63 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm26337-201ENSMUST00000178000 79 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm38238-201ENSMUST00000194334 346 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm42774-201ENSMUST00000198854 283 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm44470-201ENSMUST00000203913 142 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm18470-201ENSMUST00000207467 420 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm18464-201ENSMUST00000207803 420 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm18461-201ENSMUST00000208421 420 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm25204-201ENSMUST00000082843 106 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Mir146-201ENSMUST00000083667 65 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Gm44043-201ENSMUST00000203426 3253 ntBASIC4.95□□□□□ -1.62
Nubp1Q9R060 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Nubp1Q9R060 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm22488-201ENSMUST00000116811 127 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm13681-201ENSMUST00000117925 210 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm25985-201ENSMUST00000122677 107 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm24015-201ENSMUST00000157725 232 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm26022-201ENSMUST00000158663 108 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.94□□□□□ -1.62
Nubp1Q9R060 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm18441-201ENSMUST00000223539 617 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm22620-201ENSMUST00000082700 133 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm23039-201ENSMUST00000083870 161 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm25187-201ENSMUST00000083906 133 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.94□□□□□ -1.62
Nubp1Q9R060 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nubp1Q9R060 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms