Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm27676-201ENSMUST00000183669 61 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm28146-201ENSMUST00000185517 701 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm29365-201ENSMUST00000189461 699 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm37081-201ENSMUST00000192034 196 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm44254-201ENSMUST00000204184 322 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm44964-201ENSMUST00000207011 273 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm45658-201ENSMUST00000209197 580 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm22265-201ENSMUST00000082947 116 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm25008-201ENSMUST00000083809 81 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm23516-201ENSMUST00000093728 107 ntBASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trafd1Q3UDK1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Snord14c-201ENSMUST00000101927 86 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm24951-201ENSMUST00000102182 109 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm24120-201ENSMUST00000103978 129 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm22187-201ENSMUST00000157819 129 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm22769-201ENSMUST00000158367 98 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm5268-201ENSMUST00000189212 940 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm19244-201ENSMUST00000204340 253 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm18557-201ENSMUST00000218710 433 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm24921-201ENSMUST00000083024 107 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.93□□□□□ -1.94
Trafd1Q3UDK1 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm22936-201ENSMUST00000103955 126 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Mir883a-201ENSMUST00000104824 76 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm12393-201ENSMUST00000117084 848 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm11367-201ENSMUST00000117802 120 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm16021-201ENSMUST00000121176 219 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm23183-201ENSMUST00000122595 323 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm7582-201ENSMUST00000160831 603 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm17054-201ENSMUST00000169811 259 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm20651-201ENSMUST00000177219 329 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Mir7081-201ENSMUST00000184490 75 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm44449-201ENSMUST00000203610 153 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Snora23-201ENSMUST00000082517 184 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm23615-201ENSMUST00000082602 65 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.92□□□□□ -1.94
Trafd1Q3UDK1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms