Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm24008-201ENSMUST00000157733 138 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm24727-201ENSMUST00000158231 144 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm22174-201ENSMUST00000175050 125 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm22692-201ENSMUST00000175055 125 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm27634-201ENSMUST00000175060 126 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm22460-201ENSMUST00000175269 124 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm25535-201ENSMUST00000175364 125 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm24365-201ENSMUST00000175384 125 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm44310-201ENSMUST00000175424 126 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm22639-201ENSMUST00000175591 125 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm24979-201ENSMUST00000178626 126 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm27743-201ENSMUST00000185136 126 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm10193-201ENSMUST00000188288 231 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm37353-201ENSMUST00000194497 313 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm37817-201ENSMUST00000195276 434 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm8041-201ENSMUST00000199755 616 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm45173-201ENSMUST00000206819 305 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm2676-201ENSMUST00000207279 606 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm7624-201ENSMUST00000209702 435 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm18602-201ENSMUST00000209794 851 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm25859-201ENSMUST00000083710 91 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Olfr203-201ENSMUST00000089305 924 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ssbp4Q3U4B1 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm14240-201ENSMUST00000120353 546 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm14530-201ENSMUST00000122391 333 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm14129-201ENSMUST00000122436 291 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm22452-201ENSMUST00000122804 104 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm23666-201ENSMUST00000158053 116 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm25860-201ENSMUST00000158252 126 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm25835-201ENSMUST00000158917 144 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm27161-201ENSMUST00000183960 562 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm27233-201ENSMUST00000184030 307 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm28779-201ENSMUST00000189678 323 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm5731-201ENSMUST00000190969 481 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm37869-201ENSMUST00000193385 595 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm38041-201ENSMUST00000194445 661 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm5034-201ENSMUST00000199115 634 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm45400-201ENSMUST00000211603 653 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm8249-201ENSMUST00000219225 465 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm31849-201ENSMUST00000220306 375 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm10038-201ENSMUST00000077233 441 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Snora70-201ENSMUST00000083047 137 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.02□□□□□ -1.93
Ssbp4Q3U4B1 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm16327-201ENSMUST00000137146 228 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm24060-201ENSMUST00000157494 95 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm8392-201ENSMUST00000185647 835 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm28785-201ENSMUST00000187478 379 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm5116-201ENSMUST00000187732 463 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm29627-201ENSMUST00000187984 463 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm37097-201ENSMUST00000193676 336 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm19089-201ENSMUST00000197207 613 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm42475-201ENSMUST00000201212 295 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm6842-201ENSMUST00000211361 390 ntBASIC3.01□□□□□ -1.93
Ssbp4Q3U4B1 Gm35857-201ENSMUST00000212739 178 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms