Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm25376-201ENSMUST00000104340 133 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm14382-201ENSMUST00000117374 437 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm22211-201ENSMUST00000158097 156 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm26403-201ENSMUST00000158500 105 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm27754-201ENSMUST00000183340 126 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm28848-201ENSMUST00000189984 168 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm42988-201ENSMUST00000198116 225 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.37□□□□□ -1.55
Col9a1Q05722 CT030645.1-201ENSMUST00000224020 231 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm25139-201ENSMUST00000083247 210 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm25257-201ENSMUST00000083907 110 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 AC153801.2-201ENSMUST00000219875 3372 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col9a1Q05722 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col9a1Q05722 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm25169-201ENSMUST00000104190 129 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm13273-201ENSMUST00000119737 159 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm12086-201ENSMUST00000120863 228 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm24636-201ENSMUST00000158673 288 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm23337-201ENSMUST00000158959 118 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm25069-201ENSMUST00000175238 86 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm22411-201ENSMUST00000175462 126 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm22002-201ENSMUST00000175622 125 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm27568-201ENSMUST00000184220 99 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Mir7050-201ENSMUST00000184636 60 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm37682-201ENSMUST00000191776 522 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm43814-201ENSMUST00000197851 413 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm9616-201ENSMUST00000221154 781 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm24449-201ENSMUST00000083985 106 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.36□□□□□ -1.55
Col9a1Q05722 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col9a1Q05722 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col9a1Q05722 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Col9a1Q05722 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Mir872-201ENSMUST00000104728 81 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm12954-201ENSMUST00000118610 611 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm12094-201ENSMUST00000121781 472 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm23954-201ENSMUST00000157213 353 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm25424-201ENSMUST00000157612 58 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm27189-201ENSMUST00000184119 190 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm29308-201ENSMUST00000188863 315 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm28537-201ENSMUST00000189026 315 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm29631-201ENSMUST00000191065 315 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Trbv6-201ENSMUST00000193743 276 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm6009-201ENSMUST00000210848 280 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col9a1Q05722 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.35□□□□□ -1.55
Col9a1Q05722 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col9a1Q05722 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col9a1Q05722 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms