Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm13664-201ENSMUST00000117304 345 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm12252-201ENSMUST00000119517 219 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm25606-201ENSMUST00000158363 95 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm16490-201ENSMUST00000165299 351 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Mir6393-201ENSMUST00000183709 94 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm29484-201ENSMUST00000186067 324 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm5368-201ENSMUST00000189012 589 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm28744-201ENSMUST00000189939 340 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm42570-201ENSMUST00000195937 292 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm4248-201ENSMUST00000196905 316 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm44825-201ENSMUST00000207557 150 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm44598-201ENSMUST00000207566 150 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.91□□□□□ -1.62
Col6a1Q04857 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a1Q04857 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.91□□□□□ -1.62
Col6a1Q04857 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm25482-201ENSMUST00000083225 107 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Mir132-201ENSMUST00000083603 66 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm26164-201ENSMUST00000083793 104 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm5670-201ENSMUST00000093546 372 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Mir452-201ENSMUST00000093629 85 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.91□□□□□ -1.62
Col6a1Q04857 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a1Q04857 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a1Q04857 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.9□□□□□ -1.62
Col6a1Q04857 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col6a1Q04857 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col6a1Q04857 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.9□□□□□ -1.62
Col6a1Q04857 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col6a1Q04857 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.9□□□□□ -1.62
Col6a1Q04857 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.9□□□□□ -1.62
Col6a1Q04857 Gm15844-201ENSMUST00000118016 576 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm12686-201ENSMUST00000120546 397 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm14926-201ENSMUST00000120650 508 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm12226-201ENSMUST00000144172 876 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm25883-201ENSMUST00000157781 271 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm23638-201ENSMUST00000175073 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm23158-201ENSMUST00000175076 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm22907-201ENSMUST00000175198 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm22625-201ENSMUST00000175382 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm25999-201ENSMUST00000175398 133 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm22875-201ENSMUST00000175449 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm25197-201ENSMUST00000175516 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm27857-201ENSMUST00000176930 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm26268-201ENSMUST00000177685 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm22348-201ENSMUST00000178674 79 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm23681-201ENSMUST00000178821 126 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm22259-201ENSMUST00000178926 107 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm27695-201ENSMUST00000184301 91 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm19774-201ENSMUST00000190667 114 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm8874-201ENSMUST00000196826 286 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Mir691-201ENSMUST00000199719 78 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm44720-201ENSMUST00000206076 260 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.9□□□□□ -1.63
Col6a1Q04857 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col6a1Q04857 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a1Q04857 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a1Q04857 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.9□□□□□ -1.63
Col6a1Q04857 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col6a1Q04857 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Mir875-201ENSMUST00000104698 78 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm12156-201ENSMUST00000119188 554 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm14792-201ENSMUST00000119725 258 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm13725-201ENSMUST00000122139 207 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm22514-201ENSMUST00000122547 308 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm26101-201ENSMUST00000157246 105 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm3191-201ENSMUST00000167139 346 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm27940-201ENSMUST00000184449 98 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms