Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm7897-201ENSMUST00000193981 554 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Mir6925-201ENSMUST00000197857 70 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm44477-201ENSMUST00000199661 110 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm9375-201ENSMUST00000208899 903 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm45522-201ENSMUST00000210784 166 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm18242-201ENSMUST00000218455 542 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.12□□□□□ -2.07
Nkx3-1P97436 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.12□□□□□ -2.07
Nkx3-1P97436 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm25526-201ENSMUST00000104332 132 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm22543-201ENSMUST00000104347 94 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm15126-201ENSMUST00000118631 833 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm15536-201ENSMUST00000121411 114 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm24475-201ENSMUST00000157435 143 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm23033-201ENSMUST00000157996 134 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm22517-201ENSMUST00000158265 136 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm23005-201ENSMUST00000158950 136 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm27959-201ENSMUST00000185172 111 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm44137-201ENSMUST00000203670 367 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm45687-201ENSMUST00000209454 155 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm25799-201ENSMUST00000082643 107 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm23102-201ENSMUST00000083724 116 ntBASIC2.11□□□□□ -2.07
Nkx3-1P97436 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Nkx3-1P97436 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Mir592-201ENSMUST00000102113 96 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm14843-201ENSMUST00000119596 212 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm14577-201ENSMUST00000121134 256 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm22257-201ENSMUST00000158687 301 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm6113-201ENSMUST00000180319 639 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.1□□□□□ -2.07
Nkx3-1P97436 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm6112-201ENSMUST00000208037 629 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm9174-201ENSMUST00000078149 255 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.1□□□□□ -2.07
Nkx3-1P97436 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Nkx3-1P97436 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Snora36b-201ENSMUST00000104383 132 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Mir669d-201ENSMUST00000104644 121 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm15108-201ENSMUST00000116160 803 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm15111-201ENSMUST00000122142 878 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm16363-201ENSMUST00000132460 877 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm24875-201ENSMUST00000158888 104 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Nkx3-1P97436 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm22252-201ENSMUST00000179316 79 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Mir8090-201ENSMUST00000185078 136 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm45048-201ENSMUST00000207058 429 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm44857-201ENSMUST00000208331 196 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm44656-201ENSMUST00000208428 490 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm19233-201ENSMUST00000219772 936 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms