Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm5215-201ENSMUST00000054380 405 ntBASIC5.03□□□□□ -1.6
Sox18P43680 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.03□□□□□ -1.6
Sox18P43680 Gm22806-201ENSMUST00000082738 136 ntBASIC5.03□□□□□ -1.6
Sox18P43680 Mir384-201ENSMUST00000083565 88 ntBASIC5.03□□□□□ -1.6
Sox18P43680 Gm22353-201ENSMUST00000083918 136 ntBASIC5.03□□□□□ -1.6
Sox18P43680 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox18P43680 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.03□□□□□ -1.6
Sox18P43680 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sox18P43680 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Sox18P43680 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox18P43680 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Sox18P43680 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.03□□□□□ -1.6
Sox18P43680 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox18P43680 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.03□□□□□ -1.6
Sox18P43680 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox18P43680 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox18P43680 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sox18P43680 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sox18P43680 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm42482-201ENSMUST00000198904 1947 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Gm23193-201ENSMUST00000102427 82 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm11432-201ENSMUST00000117334 231 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm11645-201ENSMUST00000121589 649 ntBASIC5.02□□□□□ -1.61
Sox18P43680 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.02□□□□□ -1.61
Sox18P43680 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.02□□□□□ -1.61
Sox18P43680 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Gm23956-201ENSMUST00000157211 119 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm26414-201ENSMUST00000157674 269 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox18P43680 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm17186-201ENSMUST00000171742 456 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm26097-201ENSMUST00000179642 93 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm27690-201ENSMUST00000184596 126 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm29574-201ENSMUST00000186226 696 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm6003-201ENSMUST00000187903 463 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm10048-201ENSMUST00000194196 372 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm17811-201ENSMUST00000206193 387 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm9512-201ENSMUST00000223112 497 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Gm24762-201ENSMUST00000083689 104 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm25411-201ENSMUST00000083760 151 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sox18P43680 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sox18P43680 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.02□□□□□ -1.61
Sox18P43680 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.02□□□□□ -1.61
Sox18P43680 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Sox18P43680 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sox18P43680 Gm14782-201ENSMUST00000120151 195 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm11456-201ENSMUST00000121070 256 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox18P43680 Gm12854-201ENSMUST00000128518 297 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm23906-201ENSMUST00000157573 128 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm24308-201ENSMUST00000177773 114 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm18956-201ENSMUST00000192857 480 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm37417-201ENSMUST00000195257 454 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Mir465d-201ENSMUST00000196314 58 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Gm45422-201ENSMUST00000211476 246 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.01□□□□□ -1.61
Sox18P43680 Gm7665-201ENSMUST00000076710 297 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Sox18P43680 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Sox18P43680 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sox18P43680 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.01□□□□□ -1.61
Sox18P43680 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sox18P43680 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms