Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14607-201ENSMUST00000119119 491 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm9440-201ENSMUST00000119667 539 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm11344-201ENSMUST00000122011 335 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm13131-201ENSMUST00000122228 321 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm23867-201ENSMUST00000122649 274 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm16355-201ENSMUST00000128606 231 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm3104-201ENSMUST00000171004 473 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Mir7026-201ENSMUST00000184384 67 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm19257-201ENSMUST00000186121 183 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm42516-201ENSMUST00000198691 767 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm45048-201ENSMUST00000207058 429 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx2P43241 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx2P43241 Gm46194-201ENSMUST00000218136 320 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx2P43241 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdx2P43241 Gm23096-201ENSMUST00000083447 107 ntBASIC2.22□□□□□ -2.05
Cdx2P43241 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx2P43241 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cdx2P43241 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cdx2P43241 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Cdx2P43241 Gm25647-201ENSMUST00000101832 78 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm25823-201ENSMUST00000101995 78 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cdx2P43241 Gm13439-201ENSMUST00000117541 409 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.21□□□□□ -2.06
Cdx2P43241 Gm25902-201ENSMUST00000158493 318 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Cdx2P43241 Gm24220-201ENSMUST00000177753 79 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm25988-201ENSMUST00000177759 79 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm23471-201ENSMUST00000177886 79 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm26488-201ENSMUST00000178225 79 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm23449-201ENSMUST00000179208 79 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm25221-201ENSMUST00000180051 79 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Mir6363-201ENSMUST00000184880 114 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Mir7017-201ENSMUST00000184894 62 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm29330-201ENSMUST00000190032 699 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm28098-201ENSMUST00000191361 699 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm9696-202ENSMUST00000191541 830 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cdx2P43241 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm7751-201ENSMUST00000212868 709 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm17890-201ENSMUST00000221419 757 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Mir325-201ENSMUST00000083491 98 ntBASIC2.21□□□□□ -2.06
Cdx2P43241 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Cdx2P43241 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm14795-201ENSMUST00000118461 471 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm15936-201ENSMUST00000118706 460 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm12137-201ENSMUST00000119565 346 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm16100-201ENSMUST00000120489 231 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cdx2P43241 Gm27921-201ENSMUST00000183968 108 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Cdx2P43241 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Cdx2P43241 Gm43512-201ENSMUST00000198495 176 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm45150-201ENSMUST00000206051 467 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm8031-201ENSMUST00000213430 626 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.2□□□□□ -2.06
Cdx2P43241 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cdx2P43241 Olfr815-201ENSMUST00000071557 951 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm25810-201ENSMUST00000082752 108 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.2□□□□□ -2.06
Cdx2P43241 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Cdx2P43241 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Cdx2P43241 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Cdx2P43241 Gm25377-201ENSMUST00000104334 129 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm13728-201ENSMUST00000117471 400 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm13555-201ENSMUST00000121668 319 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm5958-201ENSMUST00000147698 297 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm23670-201ENSMUST00000157469 119 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm22159-201ENSMUST00000158412 130 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm24177-201ENSMUST00000158927 131 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.19□□□□□ -2.06
Cdx2P43241 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Cdx2P43241 Gm44727-201ENSMUST00000204225 451 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
Cdx2P43241 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Cdx2P43241 Gm22806-201ENSMUST00000082738 136 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Gm23249-201ENSMUST00000083369 161 ntBASIC2.19□□□□□ -2.06
Cdx2P43241 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Cdx2P43241 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms