Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm13803-201ENSMUST00000117547 489 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm13806-201ENSMUST00000117822 325 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm14602-201ENSMUST00000118625 340 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm23213-201ENSMUST00000122715 313 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm22034-201ENSMUST00000157283 134 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm23028-201ENSMUST00000158773 265 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm23476-201ENSMUST00000158881 274 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm23287-201ENSMUST00000179427 116 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm23143-201ENSMUST00000180137 116 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.46□□□□□ -2.02
Cdx1P18111 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm5224-201ENSMUST00000183060 350 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm29104-201ENSMUST00000186304 222 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm37081-201ENSMUST00000192034 196 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm37085-201ENSMUST00000193780 196 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cdx1P18111 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.46□□□□□ -2.02
Cdx1P18111 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm46193-201ENSMUST00000219399 364 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm24871-201ENSMUST00000083099 116 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Gm23847-201ENSMUST00000083829 110 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cdx1P18111 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Cdx1P18111 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cdx1P18111 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Cdx1P18111 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.46□□□□□ -2.02
Cdx1P18111 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Cdx1P18111 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
Cdx1P18111 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Cdx1P18111 Gm25407-201ENSMUST00000104102 134 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm24126-201ENSMUST00000104111 106 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm25308-201ENSMUST00000104171 158 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm14669-201ENSMUST00000118841 250 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm14554-201ENSMUST00000119548 661 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm26020-201ENSMUST00000122729 183 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm24213-201ENSMUST00000158255 258 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm17119-201ENSMUST00000163943 280 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Mir3066-201ENSMUST00000175296 83 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm26988-201ENSMUST00000183296 945 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Mir7k-201ENSMUST00000184115 110 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm43600-201ENSMUST00000202134 223 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Gm39147-201ENSMUST00000211376 465 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Mir208a-201ENSMUST00000083498 83 ntBASIC2.45□□□□□ -2.02
Cdx1P18111 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cdx1P18111 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cdx1P18111 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cdx1P18111 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cdx1P18111 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm7853-201ENSMUST00000100708 478 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm14581-201ENSMUST00000121726 198 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm25270-201ENSMUST00000122606 138 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.44□□□□□ -2.02
Cdx1P18111 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.44□□□□□ -2.02
Cdx1P18111 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm26088-201ENSMUST00000157896 131 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm24813-201ENSMUST00000175310 84 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm26991-201ENSMUST00000180950 620 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm27342-201ENSMUST00000183530 109 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Mir6353-201ENSMUST00000183596 113 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Mir6541-201ENSMUST00000183649 110 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Mir7081-201ENSMUST00000184490 75 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm27608-201ENSMUST00000184822 162 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm18667-201ENSMUST00000186523 484 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm28628-201ENSMUST00000187006 264 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm28629-201ENSMUST00000187309 263 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.44□□□□□ -2.02
Cdx1P18111 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.44□□□□□ -2.02
Cdx1P18111 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm44137-201ENSMUST00000203670 367 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm7624-201ENSMUST00000209702 435 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.44□□□□□ -2.02
Cdx1P18111 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.44□□□□□ -2.02
Cdx1P18111 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.44□□□□□ -2.02
Cdx1P18111 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 7.3 ms