Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.27□□□□□ -1.41
Clcn6O35454 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clcn6O35454 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC6.27□□□□□ -1.41
Clcn6O35454 Gm45249-201ENSMUST00000211021 348 ntBASIC6.27□□□□□ -1.41
Clcn6O35454 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.27□□□□□ -1.41
Clcn6O35454 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clcn6O35454 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
Clcn6O35454 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clcn6O35454 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.27□□□□□ -1.41
Clcn6O35454 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clcn6O35454 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
Clcn6O35454 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clcn6O35454 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clcn6O35454 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clcn6O35454 Gm15765-201ENSMUST00000118407 910 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm23599-201ENSMUST00000157261 251 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm27934-201ENSMUST00000158795 63 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm44358-201ENSMUST00000196301 98 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm15235-201ENSMUST00000200572 194 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm7990-201ENSMUST00000212126 593 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm46138-201ENSMUST00000215294 426 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm9616-201ENSMUST00000221154 781 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Gm22738-201ENSMUST00000083440 147 ntBASIC6.26□□□□□ -1.41
Clcn6O35454 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clcn6O35454 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Clcn6O35454 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clcn6O35454 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clcn6O35454 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clcn6O35454 Gm7452-202ENSMUST00000202891 3039 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Clcn6O35454 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Clcn6O35454 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Clcn6O35454 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Clcn6O35454 Gm23203-201ENSMUST00000104374 107 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm25346-201ENSMUST00000104509 128 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm12237-201ENSMUST00000120158 470 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC6.25□□□□□ -1.41
Clcn6O35454 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.25□□□□□ -1.41
Clcn6O35454 Gm23588-201ENSMUST00000157659 99 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm26162-201ENSMUST00000157793 132 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm23179-201ENSMUST00000158693 304 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.25□□□□□ -1.41
Clcn6O35454 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clcn6O35454 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Igkv1-136-201ENSMUST00000200635 297 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm44184-201ENSMUST00000204290 132 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Gm7726-201ENSMUST00000206241 231 ntBASIC6.25□□□□□ -1.41
Clcn6O35454 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clcn6O35454 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
Clcn6O35454 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Clcn6O35454 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clcn6O35454 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clcn6O35454 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clcn6O35454 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm26289-201ENSMUST00000104169 131 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm25415-201ENSMUST00000104220 132 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm22374-201ENSMUST00000104583 132 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm24396-201ENSMUST00000116905 93 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm13193-201ENSMUST00000117275 225 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm25117-201ENSMUST00000157194 144 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm10048-201ENSMUST00000194196 372 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm37838-201ENSMUST00000194464 312 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm26442-201ENSMUST00000082588 153 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.24□□□□□ -1.41
Clcn6O35454 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clcn6O35454 Gm21033-201ENSMUST00000208590 2608 ntBASIC6.24□□□□□ -1.41
Clcn6O35454 Gm9343-201ENSMUST00000209016 2609 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 279.7 ms