Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm25758-201ENSMUST00000103987 129 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm24789-201ENSMUST00000104282 131 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm15206-201ENSMUST00000119143 454 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm11785-201ENSMUST00000120165 601 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm14037-201ENSMUST00000120576 313 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm14775-201ENSMUST00000122089 310 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm6265-201ENSMUST00000149263 231 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm25278-201ENSMUST00000157267 120 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm22337-201ENSMUST00000157721 132 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm24675-201ENSMUST00000158757 259 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm3370-201ENSMUST00000171785 500 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm19427-201ENSMUST00000183619 208 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Mir3535-201ENSMUST00000197651 147 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm44076-201ENSMUST00000203072 520 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm35857-201ENSMUST00000212739 178 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm23625-201ENSMUST00000082457 100 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm26121-201ENSMUST00000083364 162 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Mir133b-201ENSMUST00000083546 119 ntBASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim39Q9ESN2 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm24170-201ENSMUST00000104124 133 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm7657-201ENSMUST00000118851 666 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm7189-201ENSMUST00000119811 429 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm25054-201ENSMUST00000157370 97 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Mir6400-201ENSMUST00000184870 92 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm28467-201ENSMUST00000190981 318 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm18470-201ENSMUST00000207467 420 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm18464-201ENSMUST00000207803 420 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm18461-201ENSMUST00000208421 420 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm9795-201ENSMUST00000062156 693 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm25260-201ENSMUST00000083053 134 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Mir20a-201ENSMUST00000083508 107 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.63□□□□□ -1.67
Trim39Q9ESN2 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim39Q9ESN2 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Gm22370-201ENSMUST00000102422 83 ntBASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Gm24586-201ENSMUST00000116695 89 ntBASIC4.62□□□□□ -1.67
Trim39Q9ESN2 Gm15560-201ENSMUST00000117107 643 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms