Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm25140-201ENSMUST00000083254 140 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm21033-201ENSMUST00000208590 2608 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Synpr-207ENSMUST00000223583 3362 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 AC091683.1-201ENSMUST00000222307 2446 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm11313-201ENSMUST00000118779 432 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm26490-201ENSMUST00000157879 140 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm25846-201ENSMUST00000158013 135 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm22328-201ENSMUST00000158074 112 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm24501-201ENSMUST00000158452 62 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Mir6355-201ENSMUST00000183687 106 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm27521-201ENSMUST00000184022 64 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Mir8106-201ENSMUST00000184520 139 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm27733-201ENSMUST00000184803 68 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm27760-201ENSMUST00000185048 114 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm18177-201ENSMUST00000188373 404 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm43604-201ENSMUST00000199799 705 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm5876-201ENSMUST00000203735 243 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm26066-201ENSMUST00000083385 109 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Clp1Q99LI9 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clp1Q99LI9 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.01□□□□□ -1.61
Clp1Q99LI9 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Gm45211-201ENSMUST00000206208 2650 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Clp1Q99LI9 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clp1Q99LI9 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Clp1Q99LI9 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Clp1Q99LI9 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clp1Q99LI9 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Gm38253-201ENSMUST00000194058 4678 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Mir294-201ENSMUST00000104710 84 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm13725-201ENSMUST00000122139 207 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5□□□□□ -1.61
Clp1Q99LI9 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5□□□□□ -1.61
Clp1Q99LI9 Gm26001-201ENSMUST00000157989 103 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Nron-204ENSMUST00000158971 370 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Mir6346-201ENSMUST00000183982 81 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm29147-201ENSMUST00000186846 315 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm29227-201ENSMUST00000187139 315 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm29034-201ENSMUST00000188099 315 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Gm28160-201ENSMUST00000191229 315 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm8242-202ENSMUST00000193056 475 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm37129-201ENSMUST00000195791 315 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm42647-201ENSMUST00000195939 459 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5□□□□□ -1.61
Clp1Q99LI9 AC154241.1-201ENSMUST00000223952 356 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 AC183096.1-201ENSMUST00000226392 130 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5□□□□□ -1.61
Clp1Q99LI9 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Clp1Q99LI9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5□□□□□ -1.61
Clp1Q99LI9 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Clp1Q99LI9 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Clp1Q99LI9 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Mir292-201ENSMUST00000104847 82 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm25808-201ENSMUST00000122784 284 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm6265-201ENSMUST00000149263 231 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm16354-201ENSMUST00000155376 150 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm24745-201ENSMUST00000157840 85 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Mir6481-201ENSMUST00000184617 110 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm3145-201ENSMUST00000188584 220 ntBASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Clp1Q99LI9 Gm37636-201ENSMUST00000193583 359 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms