Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mir5624-201ENSMUST00000176635 61 ntBASIC5.21□□□□□ -1.58
TraipQ8VIG6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 Gm9402-201ENSMUST00000196849 388 ntBASIC5.21□□□□□ -1.58
TraipQ8VIG6 Gm44654-201ENSMUST00000208052 329 ntBASIC5.21□□□□□ -1.58
TraipQ8VIG6 Snord59a-201ENSMUST00000082844 74 ntBASIC5.21□□□□□ -1.58
TraipQ8VIG6 Gm26164-201ENSMUST00000083793 104 ntBASIC5.21□□□□□ -1.58
TraipQ8VIG6 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TraipQ8VIG6 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TraipQ8VIG6 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC5.21□□□□□ -1.58
TraipQ8VIG6 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm43663-201ENSMUST00000198643 1505 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm23063-201ENSMUST00000102350 93 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm13876-201ENSMUST00000118451 261 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm13711-201ENSMUST00000119708 453 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm22037-201ENSMUST00000157280 296 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm26828-201ENSMUST00000180640 172 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm32033-201ENSMUST00000193483 339 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm34073-201ENSMUST00000195736 212 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Mir7116-201ENSMUST00000195956 70 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm19252-201ENSMUST00000204705 305 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm44989-201ENSMUST00000204749 217 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm44757-201ENSMUST00000206373 157 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm44519-201ENSMUST00000206486 122 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.2□□□□□ -1.58
TraipQ8VIG6 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.2□□□□□ -1.58
TraipQ8VIG6 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Mir92b-201ENSMUST00000102300 83 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Snord70-201ENSMUST00000104157 87 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Mir292-201ENSMUST00000104847 82 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm6079-201ENSMUST00000121356 404 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm27510-201ENSMUST00000158214 64 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm22945-201ENSMUST00000158557 157 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm45513-201ENSMUST00000210228 376 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm24166-201ENSMUST00000082724 135 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm22350-201ENSMUST00000083924 156 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TraipQ8VIG6 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.19□□□□□ -1.58
TraipQ8VIG6 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm23256-201ENSMUST00000102235 110 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm26140-201ENSMUST00000103807 110 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm11874-201ENSMUST00000117437 130 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm7123-201ENSMUST00000117647 213 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm13903-201ENSMUST00000120945 193 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm26102-201ENSMUST00000157251 284 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm24504-201ENSMUST00000157679 100 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm22908-201ENSMUST00000177620 110 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm9238-201ENSMUST00000196181 329 ntBASIC5.18□□□□□ -1.58
TraipQ8VIG6 Gm43405-201ENSMUST00000198642 337 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 243.5 ms