Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm43954-201ENSMUST00000204634 544 ntBASIC1.6□□□□□ -2.15
Col6a6Q8C6K9 Gm17872-201ENSMUST00000222550 532 ntBASIC1.6□□□□□ -2.15
Col6a6Q8C6K9 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.6□□□□□ -2.15
Col6a6Q8C6K9 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Col6a6Q8C6K9 Mir200b-201ENSMUST00000083615 70 ntBASIC1.6□□□□□ -2.15
Col6a6Q8C6K9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm37788-201ENSMUST00000193958 2705 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm11433-201ENSMUST00000118318 228 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm12926-201ENSMUST00000121158 409 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm14229-201ENSMUST00000121178 850 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm25044-201ENSMUST00000158603 104 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm8224-201ENSMUST00000166178 497 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Mir7016-201ENSMUST00000184308 72 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 AC124433.2-201ENSMUST00000223867 291 ntBASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col6a6Q8C6K9 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 Gm15951-201ENSMUST00000118377 400 ntBASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.59□□□□□ -2.16
Col6a6Q8C6K9 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Gm26406-201ENSMUST00000158503 124 ntBASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Gm42824-201ENSMUST00000199361 247 ntBASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
Col6a6Q8C6K9 Mir878-201ENSMUST00000104680 78 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm8121-201ENSMUST00000153583 499 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm22083-201ENSMUST00000157586 102 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm27468-201ENSMUST00000183577 106 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm37290-201ENSMUST00000195775 339 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm23256-201ENSMUST00000102235 110 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm11582-201ENSMUST00000121041 236 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm14982-201ENSMUST00000121102 442 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm27160-201ENSMUST00000184837 199 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 AC141884.1-201ENSMUST00000226327 636 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.57□□□□□ -2.16
Col6a6Q8C6K9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm19193-201ENSMUST00000190263 590 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm22858-201ENSMUST00000174972 76 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm15143-201ENSMUST00000178180 714 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm38018-201ENSMUST00000195651 540 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm45034-201ENSMUST00000206831 482 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Col6a6Q8C6K9 Gm38104-201ENSMUST00000195121 1895 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm22673-201ENSMUST00000104415 131 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm43550-201ENSMUST00000200597 303 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm22486-201ENSMUST00000116815 137 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm13614-201ENSMUST00000117306 503 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms