Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Trim35Q8C006 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim35Q8C006 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.18□□□□□ -1.42
Trim35Q8C006 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim35Q8C006 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm22545-201ENSMUST00000104350 132 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm13604-201ENSMUST00000119332 482 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Mir1960-201ENSMUST00000157488 78 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm23903-201ENSMUST00000157566 131 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm37037-201ENSMUST00000194475 424 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm44879-201ENSMUST00000207007 503 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm14387-201ENSMUST00000121827 2055 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.17□□□□□ -1.42
Trim35Q8C006 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim35Q8C006 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm5117-201ENSMUST00000178878 2553 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm37298-201ENSMUST00000193770 3868 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm23311-201ENSMUST00000104152 134 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm22196-201ENSMUST00000116865 109 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm23954-201ENSMUST00000157213 353 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm24440-201ENSMUST00000157236 63 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm24512-201ENSMUST00000174963 65 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Mir7685-201ENSMUST00000183555 62 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm28429-201ENSMUST00000188521 363 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm44358-201ENSMUST00000196301 98 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm42719-201ENSMUST00000197393 355 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm43424-201ENSMUST00000200484 253 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm44519-201ENSMUST00000206486 122 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Mir218-1-201ENSMUST00000083669 110 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.16□□□□□ -1.42
Trim35Q8C006 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim35Q8C006 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim35Q8C006 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm26146-201ENSMUST00000104478 185 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.15□□□□□ -1.42
Trim35Q8C006 Mir1950-201ENSMUST00000158526 74 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Mir6921-201ENSMUST00000183719 80 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm37103-201ENSMUST00000191830 115 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm38291-201ENSMUST00000193671 259 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm29778-201ENSMUST00000201667 466 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm42785-201ENSMUST00000202316 3835 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 AC126939.1-201ENSMUST00000224943 226 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 AC101945.3-201ENSMUST00000226568 153 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Gm24355-201ENSMUST00000082858 122 ntBASIC6.15□□□□□ -1.42
Trim35Q8C006 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim35Q8C006 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim35Q8C006 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.15□□□□□ -1.43
Trim35Q8C006 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim35Q8C006 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.15□□□□□ -1.43
Trim35Q8C006 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim35Q8C006 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim35Q8C006 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms