Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm22435-201ENSMUST00000158552 128 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm43304-201ENSMUST00000196803 326 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm45616-201ENSMUST00000211711 319 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm10222-201ENSMUST00000088336 294 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.02□□□□□ -1.61
Trim56Q80VI1 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim56Q80VI1 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm23941-201ENSMUST00000101953 107 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm23577-201ENSMUST00000103950 110 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Snora64-201ENSMUST00000104521 134 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm7327-201ENSMUST00000120925 652 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm9022-202ENSMUST00000183285 483 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm27899-201ENSMUST00000184715 64 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm44371-201ENSMUST00000204148 467 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm23721-201ENSMUST00000083005 107 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm23741-201ENSMUST00000097237 171 ntBASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim56Q80VI1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Trim56Q80VI1 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim56Q80VI1 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim56Q80VI1 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim56Q80VI1 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Trim56Q80VI1 Gm45378-201ENSMUST00000211063 2711 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim56Q80VI1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Trim56Q80VI1 n-R5s202-201ENSMUST00000104517 114 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm24683-201ENSMUST00000104840 88 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm23226-201ENSMUST00000116927 103 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm13046-201ENSMUST00000117391 501 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5□□□□□ -1.61
Trim56Q80VI1 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5□□□□□ -1.61
Trim56Q80VI1 Gm24690-201ENSMUST00000157759 97 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm22637-201ENSMUST00000158144 283 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm22156-201ENSMUST00000158409 141 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm24876-201ENSMUST00000158780 92 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm17062-201ENSMUST00000166987 461 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm8114-201ENSMUST00000172225 484 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm26400-201ENSMUST00000175012 85 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm22911-201ENSMUST00000177920 107 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim56Q80VI1 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5□□□□□ -1.61
Trim56Q80VI1 AC154374.1-201ENSMUST00000215351 351 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 AC130222.1-201ENSMUST00000221198 256 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 AC154241.1-201ENSMUST00000223952 356 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Gm36931-201ENSMUST00000192997 4801 ntBASIC5□□□□□ -1.61
Trim56Q80VI1 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Trim56Q80VI1 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm15151-201ENSMUST00000117106 177 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm14880-201ENSMUST00000117581 292 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm14107-201ENSMUST00000117774 330 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm12815-201ENSMUST00000121737 135 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm22613-201ENSMUST00000122679 292 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm23121-201ENSMUST00000157653 173 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm24402-201ENSMUST00000157873 91 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm22314-201ENSMUST00000158007 281 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm27410-201ENSMUST00000183851 115 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm27254-201ENSMUST00000183926 517 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm29352-201ENSMUST00000188054 544 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm43415-201ENSMUST00000201934 750 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm7407-201ENSMUST00000208301 568 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Gm7093-201ENSMUST00000223004 581 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.99□□□□□ -1.61
Trim56Q80VI1 Mir99a-201ENSMUST00000083596 65 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms