Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm23422-201ENSMUST00000102000 107 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14706-201ENSMUST00000117744 255 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14107-201ENSMUST00000117774 330 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15745-201ENSMUST00000119807 115 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm11584-201ENSMUST00000120636 325 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14841-201ENSMUST00000121067 758 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm27723-201ENSMUST00000157398 63 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm22598-201ENSMUST00000157600 127 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm26373-201ENSMUST00000157833 103 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm23892-201ENSMUST00000158105 130 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm22389-201ENSMUST00000158193 301 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm44648-201ENSMUST00000208267 329 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm6065-201ENSMUST00000081336 492 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.68□□□□□ -1.66
Sh3rf1Q69ZI1 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm23705-201ENSMUST00000104370 130 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14940-201ENSMUST00000119309 495 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm14768-201ENSMUST00000122126 678 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm2182-201ENSMUST00000145243 663 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm25624-201ENSMUST00000157222 275 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm26347-201ENSMUST00000157526 131 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm22849-201ENSMUST00000157713 307 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm26085-201ENSMUST00000157900 116 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm26034-201ENSMUST00000158154 116 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm16318-201ENSMUST00000162402 601 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm29352-201ENSMUST00000188054 544 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm2522-201ENSMUST00000204280 322 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm44757-201ENSMUST00000206373 157 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Gm6112-201ENSMUST00000208037 629 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sh3rf1Q69ZI1 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm24867-201ENSMUST00000104161 107 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm11576-201ENSMUST00000117433 417 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15783-201ENSMUST00000117521 633 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15377-201ENSMUST00000119594 246 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm11430-201ENSMUST00000121317 217 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm12779-201ENSMUST00000121496 143 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm12226-201ENSMUST00000144172 876 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm24675-201ENSMUST00000158757 259 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm25447-201ENSMUST00000158997 128 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm24968-201ENSMUST00000179817 107 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm43407-201ENSMUST00000199816 317 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm42665-201ENSMUST00000202100 586 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Gm4987-201ENSMUST00000078326 408 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Snora52-201ENSMUST00000082732 137 ntBASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Sh3rf1Q69ZI1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms