Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.71□□□□□ -1.66
Trim28Q62318 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Trim28Q62318 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm25563-201ENSMUST00000104603 74 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm25565-201ENSMUST00000104605 105 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm15148-201ENSMUST00000117602 156 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm15382-201ENSMUST00000118011 537 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm13076-201ENSMUST00000118041 204 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm12155-201ENSMUST00000121267 160 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm12276-201ENSMUST00000121709 301 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm22345-201ENSMUST00000122644 107 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm23123-201ENSMUST00000157648 144 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm24727-201ENSMUST00000158231 144 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm23473-201ENSMUST00000158883 116 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim28Q62318 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm9722-201ENSMUST00000194568 802 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm42832-201ENSMUST00000196361 745 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm44161-201ENSMUST00000203532 253 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm5322-201ENSMUST00000206142 699 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm44923-201ENSMUST00000206673 85 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.7□□□□□ -1.66
Trim28Q62318 Gm17989-201ENSMUST00000211543 412 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.7□□□□□ -1.66
Trim28Q62318 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim28Q62318 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim28Q62318 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim28Q62318 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim28Q62318 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim28Q62318 Neat1-201ENSMUST00000173672 20771 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim28Q62318 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Trim28Q62318 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Trim28Q62318 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim28Q62318 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim28Q62318 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm22115-201ENSMUST00000103976 133 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm23923-201ENSMUST00000104108 133 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm9850-201ENSMUST00000117916 227 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm11784-201ENSMUST00000118568 474 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm5762-201ENSMUST00000119204 258 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm12935-201ENSMUST00000119352 246 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm14534-201ENSMUST00000120045 357 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm2768-201ENSMUST00000121062 250 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm14804-201ENSMUST00000122322 508 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm27592-201ENSMUST00000157729 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm16101-201ENSMUST00000160695 430 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.69□□□□□ -1.66
Trim28Q62318 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.69□□□□□ -1.66
Trim28Q62318 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm22174-201ENSMUST00000175050 125 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm22692-201ENSMUST00000175055 125 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm27634-201ENSMUST00000175060 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm26460-201ENSMUST00000175061 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm22460-201ENSMUST00000175269 124 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm25535-201ENSMUST00000175364 125 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm24365-201ENSMUST00000175384 125 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm44310-201ENSMUST00000175424 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm22639-201ENSMUST00000175591 125 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm24979-201ENSMUST00000178626 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm26177-201ENSMUST00000178683 107 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm26866-201ENSMUST00000180414 802 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm27743-201ENSMUST00000185136 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm29134-201ENSMUST00000186579 126 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm29229-201ENSMUST00000188874 323 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm28241-201ENSMUST00000190916 235 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm43541-201ENSMUST00000197208 581 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm2189-201ENSMUST00000201419 429 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm32381-201ENSMUST00000203192 476 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm19252-201ENSMUST00000204705 305 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm46234-201ENSMUST00000218702 259 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim28Q62318 Gm23679-201ENSMUST00000083161 119 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm25859-201ENSMUST00000083710 91 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Gm3867-201ENSMUST00000086108 279 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.69□□□□□ -1.66
Trim28Q62318 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim28Q62318 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.69□□□□□ -1.66
Trim28Q62318 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim28Q62318 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim28Q62318 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim28Q62318 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms