Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col9a1Q05722 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm24170-201ENSMUST00000104124 133 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm23481-201ENSMUST00000104173 131 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm11673-201ENSMUST00000117846 331 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm5396-201ENSMUST00000121222 532 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm25805-201ENSMUST00000122788 108 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm12854-201ENSMUST00000128518 297 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm22320-201ENSMUST00000157149 312 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm25393-201ENSMUST00000157336 285 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm5777-201ENSMUST00000177265 448 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Mir21b-201ENSMUST00000184317 108 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm37445-201ENSMUST00000195318 242 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm44338-201ENSMUST00000198614 110 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm42774-201ENSMUST00000198854 283 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm17887-201ENSMUST00000200194 547 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm32308-201ENSMUST00000203053 280 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm18462-201ENSMUST00000208112 417 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 AC154527.5-201ENSMUST00000224448 496 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 AC160984.2-201ENSMUST00000224927 791 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm7665-201ENSMUST00000076710 297 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm24356-201ENSMUST00000082859 106 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col9a1Q05722 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.4□□□□□ -1.55
Col9a1Q05722 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.4□□□□□ -1.55
Col9a1Q05722 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col9a1Q05722 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.4□□□□□ -1.55
Col9a1Q05722 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col9a1Q05722 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col9a1Q05722 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.4□□□□□ -1.55
Col9a1Q05722 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col9a1Q05722 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm24282-201ENSMUST00000104232 66 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm2862-201ENSMUST00000161524 328 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm22177-201ENSMUST00000175002 158 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm36259-201ENSMUST00000197340 392 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm23847-201ENSMUST00000083829 110 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm23042-201ENSMUST00000083866 101 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col9a1Q05722 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.39□□□□□ -1.55
Col9a1Q05722 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col9a1Q05722 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.39□□□□□ -1.55
Col9a1Q05722 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm37236-201ENSMUST00000193670 3249 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm12897-201ENSMUST00000120341 250 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm24141-201ENSMUST00000122776 115 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm24054-201ENSMUST00000158619 105 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm38270-201ENSMUST00000192721 407 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC5.38□□□□□ -1.55
Col9a1Q05722 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm6303-201ENSMUST00000210123 471 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm23972-201ENSMUST00000083322 165 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm25895-201ENSMUST00000083714 100 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm37941-201ENSMUST00000192170 2309 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.38□□□□□ -1.55
Col9a1Q05722 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col9a1Q05722 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col9a1Q05722 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Col9a1Q05722 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col9a1Q05722 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col9a1Q05722 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Col9a1Q05722 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.37□□□□□ -1.55
Col9a1Q05722 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col9a1Q05722 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC5.37□□□□□ -1.55
Col9a1Q05722 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms