Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Usp4P35123 Gm11849-201ENSMUST00000121293 261 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Gm17183-201ENSMUST00000171170 493 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Gm26622-201ENSMUST00000180520 298 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.41□□□□□ -1.7
Usp4P35123 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.41□□□□□ -1.7
Usp4P35123 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Usp4P35123 Gm43355-201ENSMUST00000196541 346 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Gm43441-201ENSMUST00000201458 205 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Gm45031-201ENSMUST00000206800 288 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Gm45499-201ENSMUST00000211656 280 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Gm46190-201ENSMUST00000219650 427 ntBASIC4.41□□□□□ -1.7
Usp4P35123 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.41□□□□□ -1.7
Usp4P35123 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp4P35123 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.41□□□□□ -1.7
Usp4P35123 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC4.41□□□□□ -1.7
Usp4P35123 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.41□□□□□ -1.7
Usp4P35123 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Usp4P35123 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Usp4P35123 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Usp4P35123 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp4P35123 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Usp4P35123 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.4□□□□□ -1.7
Usp4P35123 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.4□□□□□ -1.7
Usp4P35123 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Usp4P35123 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.4□□□□□ -1.7
Usp4P35123 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm12137-201ENSMUST00000119565 346 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm13518-201ENSMUST00000120018 233 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm8200-201ENSMUST00000122390 222 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.4□□□□□ -1.71
Usp4P35123 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm22849-201ENSMUST00000157713 307 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm25184-201ENSMUST00000157753 163 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm24905-201ENSMUST00000158129 104 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm22637-201ENSMUST00000158144 283 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm22156-201ENSMUST00000158409 141 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm8207-201ENSMUST00000171204 502 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm27940-201ENSMUST00000184449 98 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm28654-201ENSMUST00000189801 379 ntBASIC4.4□□□□□ -1.71
Usp4P35123 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Usp4P35123 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm42665-201ENSMUST00000202100 586 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.4□□□□□ -1.71
Usp4P35123 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gm6303-201ENSMUST00000210123 471 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.4□□□□□ -1.71
Usp4P35123 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.4□□□□□ -1.71
Usp4P35123 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.4□□□□□ -1.71
Usp4P35123 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm6462-201ENSMUST00000081488 304 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp4P35123 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Usp4P35123 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Usp4P35123 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Usp4P35123 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Usp4P35123 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Usp4P35123 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp4P35123 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.4□□□□□ -1.71
Usp4P35123 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Usp4P35123 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.4□□□□□ -1.71
Usp4P35123 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Usp4P35123 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Usp4P35123 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Usp4P35123 Gm24951-201ENSMUST00000102182 109 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm23178-201ENSMUST00000116782 95 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm15426-201ENSMUST00000117823 556 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm6584-201ENSMUST00000119671 447 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm15926-201ENSMUST00000120492 550 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm11403-201ENSMUST00000122195 369 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm6956-201ENSMUST00000134724 546 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.39□□□□□ -1.71
Usp4P35123 Gm12226-201ENSMUST00000144172 876 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm6058-201ENSMUST00000154261 399 ntBASIC4.39□□□□□ -1.71
Usp4P35123 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Gm23499-201ENSMUST00000157736 268 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm25264-201ENSMUST00000158519 117 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm24546-201ENSMUST00000158652 102 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm16303-201ENSMUST00000161498 390 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Mir5099-201ENSMUST00000175257 74 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.39□□□□□ -1.71
Usp4P35123 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Gm29479-201ENSMUST00000190352 455 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Usp4P35123 Gm37732-201ENSMUST00000194377 316 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm44083-201ENSMUST00000203114 337 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.39□□□□□ -1.71
Usp4P35123 Gm45434-201ENSMUST00000210550 293 ntBASIC4.39□□□□□ -1.71
Usp4P35123 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms