Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sdc1P18828 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm14987-201ENSMUST00000117820 676 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm11285-201ENSMUST00000118443 322 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm14103-201ENSMUST00000119075 366 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm12016-201ENSMUST00000119079 681 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm12935-201ENSMUST00000119352 246 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm12607-201ENSMUST00000120724 493 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm14363-201ENSMUST00000122304 409 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm24936-201ENSMUST00000122598 247 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm22613-201ENSMUST00000122679 292 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm23588-201ENSMUST00000157659 99 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm23032-201ENSMUST00000157995 107 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm23112-201ENSMUST00000158606 125 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm17162-201ENSMUST00000168538 473 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm29408-201ENSMUST00000187536 216 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm28802-201ENSMUST00000188624 944 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm37102-201ENSMUST00000195740 1105 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm44392-201ENSMUST00000196758 115 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm17893-201ENSMUST00000203017 770 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm44615-201ENSMUST00000206548 358 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm40598-201ENSMUST00000222953 547 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm6030-201ENSMUST00000078768 402 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm10042-201ENSMUST00000079884 78 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.38□□□□□ -2.03
Sdc1P18828 Gm45884-201ENSMUST00000209540 3416 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.38□□□□□ -2.03
Sdc1P18828 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sdc1P18828 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Sdc1P18828 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 Mir883a-201ENSMUST00000104824 76 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc1P18828 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm13076-201ENSMUST00000118041 204 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm14918-201ENSMUST00000118153 268 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm11219-201ENSMUST00000118565 358 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm11384-201ENSMUST00000121376 303 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm25945-201ENSMUST00000122484 135 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm14368-201ENSMUST00000145305 415 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm25979-201ENSMUST00000157177 138 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm25283-201ENSMUST00000157272 77 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm25637-201ENSMUST00000157529 107 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm23540-201ENSMUST00000157543 164 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm23098-201ENSMUST00000157552 299 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm26406-201ENSMUST00000158503 124 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm23028-201ENSMUST00000158773 265 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm23704-201ENSMUST00000158844 340 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm6395-201ENSMUST00000167639 691 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Snord53-201ENSMUST00000175146 78 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm24086-201ENSMUST00000175171 98 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm26219-201ENSMUST00000175216 71 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm8676-201ENSMUST00000184206 637 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm8392-201ENSMUST00000185647 835 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm42818-201ENSMUST00000198869 987 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm44903-201ENSMUST00000206840 130 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm44927-201ENSMUST00000207573 716 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm45288-201ENSMUST00000210236 151 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Mir137-201ENSMUST00000083635 73 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Gm24446-201ENSMUST00000083982 156 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.37□□□□□ -2.03
Sdc1P18828 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Sdc1P18828 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Sdc1P18828 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Sdc1P18828 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sdc1P18828 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Sdc1P18828 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Sdc1P18828 Gm24125-201ENSMUST00000104105 137 ntBASIC2.36□□□□□ -2.03
Sdc1P18828 Gm14647-201ENSMUST00000119392 680 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms