Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msx1P13297 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msx1P13297 Mir6400-201ENSMUST00000184870 92 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm4322-201ENSMUST00000191094 336 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msx1P13297 Gm43444-201ENSMUST00000198123 291 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Msx1P13297 Gm18991-201ENSMUST00000209225 746 ntBASIC5.05□□□□□ -1.6
Msx1P13297 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.05□□□□□ -1.6
Msx1P13297 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.05□□□□□ -1.6
Msx1P13297 AC154213.2-201ENSMUST00000227138 187 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm22806-201ENSMUST00000082738 136 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm22294-201ENSMUST00000083308 104 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm22353-201ENSMUST00000083918 136 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.05□□□□□ -1.6
Msx1P13297 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx1P13297 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx1P13297 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx1P13297 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.05□□□□□ -1.6
Msx1P13297 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Msx1P13297 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Msx1P13297 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx1P13297 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
Msx1P13297 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx1P13297 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx1P13297 Gm16128-201ENSMUST00000117855 626 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Gm25293-201ENSMUST00000122792 285 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Gm16218-201ENSMUST00000155424 388 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.04□□□□□ -1.6
Msx1P13297 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.04□□□□□ -1.6
Msx1P13297 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Mir6412-201ENSMUST00000184477 97 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Gm2914-201ENSMUST00000186120 328 ntBASIC5.04□□□□□ -1.6
Msx1P13297 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.04□□□□□ -1.6
Msx1P13297 Mir6516-201ENSMUST00000196236 110 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Mir465d-201ENSMUST00000196314 58 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Mir5121-201ENSMUST00000198528 74 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.04□□□□□ -1.6
Msx1P13297 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC5.04□□□□□ -1.6
Msx1P13297 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Msx1P13297 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.04□□□□□ -1.6
Msx1P13297 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx1P13297 Mir17-201ENSMUST00000083574 84 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Gm25411-201ENSMUST00000083760 151 ntBASIC5.04□□□□□ -1.6
Msx1P13297 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msx1P13297 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx1P13297 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx1P13297 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Msx1P13297 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Msx1P13297 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Msx1P13297 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx1P13297 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx1P13297 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Msx1P13297 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC5.03□□□□□ -1.6
Msx1P13297 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx1P13297 Gm22488-201ENSMUST00000116811 127 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm11366-201ENSMUST00000119279 429 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm14748-201ENSMUST00000119819 411 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm14922-201ENSMUST00000121131 163 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm29320-201ENSMUST00000185235 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28344-201ENSMUST00000185704 279 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28339-201ENSMUST00000185845 696 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28471-201ENSMUST00000185994 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm29179-202ENSMUST00000186138 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28598-201ENSMUST00000186490 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28057-201ENSMUST00000186603 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm29448-201ENSMUST00000186675 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm29314-201ENSMUST00000186800 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28253-202ENSMUST00000187971 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28468-201ENSMUST00000188536 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm28896-201ENSMUST00000188609 696 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm29268-201ENSMUST00000188669 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm29169-201ENSMUST00000189835 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Msx1P13297 Gm37172-201ENSMUST00000191926 615 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm38107-201ENSMUST00000194873 696 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm42647-201ENSMUST00000195939 459 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Mir721-201ENSMUST00000200230 88 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm44214-201ENSMUST00000204153 606 ntBASIC5.03□□□□□ -1.6
Msx1P13297 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm23722-201ENSMUST00000083002 130 ntBASIC5.03□□□□□ -1.6
Msx1P13297 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Msx1P13297 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Msx1P13297 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Msx1P13297 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Msx1P13297 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
Msx1P13297 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Msx1P13297 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms