Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col5a1O88207 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm14989-201ENSMUST00000120497 207 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm23885-201ENSMUST00000122682 294 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.17□□□□□ -2.06
Col5a1O88207 Snora81-201ENSMUST00000157310 178 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm17183-201ENSMUST00000171170 493 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col5a1O88207 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col5a1O88207 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col5a1O88207 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col5a1O88207 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm9850-201ENSMUST00000117916 227 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Trav20-201ENSMUST00000142754 347 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm25557-201ENSMUST00000158084 315 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm17061-201ENSMUST00000163167 499 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm17177-201ENSMUST00000169144 483 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
Col5a1O88207 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col5a1O88207 Gm27580-201ENSMUST00000183666 149 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm21489-201ENSMUST00000189668 818 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.17□□□□□ -2.06
Col5a1O88207 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Gm5471-201ENSMUST00000072732 337 ntBASIC2.17□□□□□ -2.06
Col5a1O88207 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Col5a1O88207 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col5a1O88207 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Snord14c-201ENSMUST00000101927 86 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm23942-201ENSMUST00000101956 107 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Mir804-201ENSMUST00000103251 95 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm23205-201ENSMUST00000158671 103 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col5a1O88207 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm10074-201ENSMUST00000174543 249 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm27608-201ENSMUST00000184822 162 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Mir1892-201ENSMUST00000197752 80 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm43345-201ENSMUST00000199484 269 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm43901-201ENSMUST00000203247 453 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col5a1O88207 Gm8031-201ENSMUST00000213430 626 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.16□□□□□ -2.06
Col5a1O88207 AC159263.3-201ENSMUST00000223434 460 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col5a1O88207 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.16□□□□□ -2.06
Col5a1O88207 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col5a1O88207 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Col5a1O88207 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col5a1O88207 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm13080-201ENSMUST00000120556 420 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm14229-201ENSMUST00000121178 850 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm14253-201ENSMUST00000122112 639 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm25966-201ENSMUST00000157169 117 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm22818-201ENSMUST00000157446 104 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm26411-201ENSMUST00000157668 107 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm22556-201ENSMUST00000157803 100 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm23043-201ENSMUST00000157890 109 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm16561-201ENSMUST00000163001 192 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col5a1O88207 Gm24638-201ENSMUST00000179807 132 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gm37732-201ENSMUST00000194377 316 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.15□□□□□ -2.06
Col5a1O88207 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.15□□□□□ -2.06
Col5a1O88207 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.15□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms