Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm18458-201ENSMUST00000207908 369 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm17999-201ENSMUST00000211568 542 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm5750-201ENSMUST00000218711 801 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm18921-201ENSMUST00000221798 366 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm6462-201ENSMUST00000081488 304 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm24671-201ENSMUST00000104159 158 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm12125-201ENSMUST00000117261 736 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm12820-201ENSMUST00000119233 342 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm15029-201ENSMUST00000119742 199 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm14875-201ENSMUST00000120881 319 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm15244-201ENSMUST00000121122 130 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm14846-201ENSMUST00000121868 216 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm11506-201ENSMUST00000122414 470 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Mir1963-201ENSMUST00000158594 59 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm16326-201ENSMUST00000162843 414 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm26195-201ENSMUST00000175035 101 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Mir7008-201ENSMUST00000184398 63 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Mir6372-201ENSMUST00000185114 109 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm29657-201ENSMUST00000189807 342 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm36946-201ENSMUST00000192706 435 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm37421-201ENSMUST00000193088 132 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm4321-201ENSMUST00000200520 442 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm34091-201ENSMUST00000200875 604 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm43925-201ENSMUST00000203498 206 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm6303-201ENSMUST00000210123 471 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 LOC667541-201ENSMUST00000223408 278 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm23330-201ENSMUST00000082660 164 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Gm23041-201ENSMUST00000083868 106 ntBASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim39Q9ESN2 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Trim39Q9ESN2 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Trim39Q9ESN2 Gm24423-201ENSMUST00000101982 106 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm23746-201ENSMUST00000104229 125 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm8595-201ENSMUST00000118250 630 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm11742-201ENSMUST00000119903 233 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm14601-201ENSMUST00000120892 236 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm12422-201ENSMUST00000121431 302 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm26479-201ENSMUST00000122620 106 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm2325-201ENSMUST00000186637 581 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm44844-201ENSMUST00000207242 336 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm18016-201ENSMUST00000216119 801 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm16419-201ENSMUST00000221057 625 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Gm10916-201ENSMUST00000080330 483 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Mir471-201ENSMUST00000093596 67 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim39Q9ESN2 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.65□□□□□ -1.67
Trim39Q9ESN2 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms