Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm29408-201ENSMUST00000187536 216 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm28098-201ENSMUST00000191361 699 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm44142-201ENSMUST00000203358 311 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Ushbp1Q8R370 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm11490-201ENSMUST00000118128 272 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm12335-201ENSMUST00000119738 327 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm26276-201ENSMUST00000157099 109 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm22398-201ENSMUST00000174941 125 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm25731-201ENSMUST00000175167 125 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm28141-201ENSMUST00000186676 342 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm42451-201ENSMUST00000197410 244 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm9309-201ENSMUST00000223537 546 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm5265-201ENSMUST00000076828 342 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Mir34b-201ENSMUST00000083558 84 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.44□□□□□ -1.7
Ushbp1Q8R370 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm24127-201ENSMUST00000104110 130 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm22032-201ENSMUST00000116946 116 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm14299-201ENSMUST00000117586 397 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm11386-201ENSMUST00000117761 347 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm15994-201ENSMUST00000118029 402 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm12897-201ENSMUST00000120341 250 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm26255-201ENSMUST00000122492 103 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm23865-201ENSMUST00000157723 97 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm21171-201ENSMUST00000180048 673 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm37791-201ENSMUST00000195081 286 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.43□□□□□ -1.7
Ushbp1Q8R370 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm25764-201ENSMUST00000104092 134 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm23175-201ENSMUST00000104371 132 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm25727-201ENSMUST00000104522 131 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm15313-201ENSMUST00000119179 282 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm12578-201ENSMUST00000121244 417 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm21960-201ENSMUST00000181924 452 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm27718-201ENSMUST00000183721 86 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm29134-201ENSMUST00000186579 126 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm28241-201ENSMUST00000190916 235 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm37757-201ENSMUST00000193072 210 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm34091-201ENSMUST00000200875 604 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Gm34779-201ENSMUST00000210036 263 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ushbp1Q8R370 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms