Protein–RNA interactions for Protein: Q8BG40

Katnb1, Katanin p80 WD40 repeat-containing subunit B1, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Katnb1Q8BG40 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm16289-201ENSMUST00000162079 183 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm17063-201ENSMUST00000168135 456 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm26297-201ENSMUST00000179464 132 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm27428-201ENSMUST00000184289 110 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Mir6405-201ENSMUST00000184584 124 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm29045-201ENSMUST00000187278 698 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm38231-201ENSMUST00000192030 347 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm42924-201ENSMUST00000197261 185 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm42958-201ENSMUST00000197595 318 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm43746-201ENSMUST00000200028 317 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm44332-201ENSMUST00000203712 433 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm44615-201ENSMUST00000206548 358 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm44964-201ENSMUST00000207011 273 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm45439-201ENSMUST00000211723 359 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Gm24622-201ENSMUST00000082619 162 ntBASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Katnb1Q8BG40 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm5937-201ENSMUST00000119715 643 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm12213-201ENSMUST00000119924 353 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm13751-201ENSMUST00000120280 752 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm13210-201ENSMUST00000121483 273 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm15065-201ENSMUST00000121699 273 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm23865-201ENSMUST00000157723 97 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm20415-201ENSMUST00000172877 423 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm17872-201ENSMUST00000222550 532 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Katnb1Q8BG40 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Mir706-201ENSMUST00000102262 84 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm13803-201ENSMUST00000117547 489 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Mir7047-201ENSMUST00000184595 64 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm28628-201ENSMUST00000187006 264 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm28629-201ENSMUST00000187309 263 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm18982-201ENSMUST00000198118 529 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm18729-201ENSMUST00000217230 621 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm25202-201ENSMUST00000082838 191 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Mir350-201ENSMUST00000083639 99 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 AF357428-201ENSMUST00000083815 69 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.74□□□□□ -1.97
Katnb1Q8BG40 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm13614-201ENSMUST00000117306 503 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm13541-201ENSMUST00000119519 283 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm14159-201ENSMUST00000119832 451 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm11414-201ENSMUST00000121795 263 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm22187-201ENSMUST00000157819 129 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm24534-201ENSMUST00000157949 291 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm22839-201ENSMUST00000158436 304 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm8338-201ENSMUST00000163928 363 ntBASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Katnb1Q8BG40 Gm26928-201ENSMUST00000182674 572 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms