Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm42850-201ENSMUST00000202094 201 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm44142-201ENSMUST00000203358 311 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm7407-201ENSMUST00000208301 568 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 BC051076-202ENSMUST00000199477 2868 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.72□□□□□ -1.65
Rnf180Q3U827 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnf180Q3U827 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Rnf180Q3U827 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm24374-201ENSMUST00000104394 106 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm26019-201ENSMUST00000104407 119 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm11313-201ENSMUST00000118779 432 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm14049-201ENSMUST00000121009 636 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm16021-201ENSMUST00000121176 219 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm23668-201ENSMUST00000157465 111 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm23473-201ENSMUST00000158883 116 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm24418-201ENSMUST00000177597 79 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm24639-201ENSMUST00000178518 79 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm23076-201ENSMUST00000179082 79 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm25077-201ENSMUST00000179157 79 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm38076-201ENSMUST00000193889 450 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm44475-201ENSMUST00000204041 424 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 AC144783.2-201ENSMUST00000219089 195 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm7984-201ENSMUST00000060640 538 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnf180Q3U827 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.71□□□□□ -1.66
Rnf180Q3U827 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm22834-201ENSMUST00000102021 79 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm24951-201ENSMUST00000102182 109 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm14594-201ENSMUST00000118052 537 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm14590-201ENSMUST00000118934 537 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm12578-201ENSMUST00000121244 417 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm14562-201ENSMUST00000129885 543 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm23380-201ENSMUST00000158448 103 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm2862-201ENSMUST00000161524 328 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm26092-201ENSMUST00000179798 97 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm25156-201ENSMUST00000179809 79 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm14596-201ENSMUST00000180268 537 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm14595-201ENSMUST00000180335 537 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm28700-201ENSMUST00000187614 579 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm42666-201ENSMUST00000201954 152 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm45312-201ENSMUST00000210566 311 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm23515-201ENSMUST00000082829 107 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm4017-201ENSMUST00000084813 338 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.7□□□□□ -1.66
Rnf180Q3U827 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rnf180Q3U827 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf180Q3U827 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf180Q3U827 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.69□□□□□ -1.66
Rnf180Q3U827 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.69□□□□□ -1.66
Rnf180Q3U827 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rnf180Q3U827 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf180Q3U827 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rnf180Q3U827 Gm22656-201ENSMUST00000104199 171 ntBASIC4.69□□□□□ -1.66
Rnf180Q3U827 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.69□□□□□ -1.66
Rnf180Q3U827 Gm11386-201ENSMUST00000117761 347 ntBASIC4.69□□□□□ -1.66
Rnf180Q3U827 Gm22956-201ENSMUST00000122520 80 ntBASIC4.69□□□□□ -1.66
Rnf180Q3U827 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.69□□□□□ -1.66
Rnf180Q3U827 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms