Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm15190-201ENSMUST00000120855 276 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm22956-201ENSMUST00000122520 80 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm22722-201ENSMUST00000157467 132 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm22833-201ENSMUST00000158292 132 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm26173-201ENSMUST00000158416 136 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm23053-201ENSMUST00000175136 96 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Gm27161-201ENSMUST00000183960 562 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm18384-201ENSMUST00000195974 808 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm43899-201ENSMUST00000203675 246 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm44208-201ENSMUST00000205199 421 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm45048-201ENSMUST00000207058 429 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm45273-201ENSMUST00000211559 281 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm9068-201ENSMUST00000217393 455 ntBASIC3.6□□□□□ -1.83
CiitaP79621 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.6□□□□□ -1.83
CiitaP79621 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CiitaP79621 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.6□□□□□ -1.83
CiitaP79621 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CiitaP79621 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CiitaP79621 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CiitaP79621 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CiitaP79621 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CiitaP79621 Gm22497-201ENSMUST00000104499 131 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm13761-201ENSMUST00000117238 807 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm12891-201ENSMUST00000119358 240 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm12118-201ENSMUST00000119766 532 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm13751-201ENSMUST00000120280 752 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.59□□□□□ -1.83
CiitaP79621 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.59□□□□□ -1.83
CiitaP79621 Gm24914-201ENSMUST00000157285 313 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm24534-201ENSMUST00000157949 291 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm17064-201ENSMUST00000167690 452 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm24897-201ENSMUST00000179033 107 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Mir7578-201ENSMUST00000183455 82 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm29104-201ENSMUST00000186304 222 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CiitaP79621 Gm20915-201ENSMUST00000191575 663 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm37104-201ENSMUST00000193278 196 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.59□□□□□ -1.83
CiitaP79621 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm19649-201ENSMUST00000201126 822 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm43415-201ENSMUST00000201934 750 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm43026-201ENSMUST00000202972 325 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm45023-201ENSMUST00000207951 379 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm17991-201ENSMUST00000208139 297 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm7948-201ENSMUST00000212607 844 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm18557-201ENSMUST00000218710 433 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.59□□□□□ -1.83
CiitaP79621 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.59□□□□□ -1.83
CiitaP79621 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.59□□□□□ -1.83
CiitaP79621 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.59□□□□□ -1.83
CiitaP79621 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CiitaP79621 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CiitaP79621 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CiitaP79621 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CiitaP79621 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.59□□□□□ -1.84
CiitaP79621 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CiitaP79621 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CiitaP79621 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CiitaP79621 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CiitaP79621 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CiitaP79621 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CiitaP79621 Gm14359-201ENSMUST00000118883 424 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm14360-201ENSMUST00000120670 393 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm14101-201ENSMUST00000121502 473 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm12858-201ENSMUST00000121913 208 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.58□□□□□ -1.84
CiitaP79621 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CiitaP79621 Gm9498-201ENSMUST00000140849 291 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm22521-201ENSMUST00000158272 134 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm25194-201ENSMUST00000177987 79 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.58□□□□□ -1.84
CiitaP79621 Gm37828-201ENSMUST00000192496 432 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm18433-202ENSMUST00000195682 196 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.58□□□□□ -1.84
CiitaP79621 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.58□□□□□ -1.84
CiitaP79621 Gm7675-201ENSMUST00000208828 686 ntBASIC3.58□□□□□ -1.84
CiitaP79621 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.58□□□□□ -1.84
CiitaP79621 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CiitaP79621 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms