Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NcanP55066 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NcanP55066 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NcanP55066 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NcanP55066 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NcanP55066 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NcanP55066 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NcanP55066 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NcanP55066 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.47□□□□□ -1.85
NcanP55066 Gm12568-201ENSMUST00000117362 624 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm13607-201ENSMUST00000117875 539 ntBASIC3.47□□□□□ -1.85
NcanP55066 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm16363-201ENSMUST00000132460 877 ntBASIC3.47□□□□□ -1.85
NcanP55066 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.47□□□□□ -1.85
NcanP55066 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.47□□□□□ -1.85
NcanP55066 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.47□□□□□ -1.85
NcanP55066 Gm6486-201ENSMUST00000166202 434 ntBASIC3.47□□□□□ -1.85
NcanP55066 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NcanP55066 Gm28356-202ENSMUST00000187566 858 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm20811-201ENSMUST00000190500 553 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm28552-201ENSMUST00000190725 388 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm37353-201ENSMUST00000194497 313 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm44349-201ENSMUST00000197048 123 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.47□□□□□ -1.85
NcanP55066 Gm43600-201ENSMUST00000202134 223 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm44254-201ENSMUST00000204184 322 ntBASIC3.47□□□□□ -1.85
NcanP55066 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.47□□□□□ -1.85
NcanP55066 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.47□□□□□ -1.85
NcanP55066 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.47□□□□□ -1.85
NcanP55066 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.47□□□□□ -1.85
NcanP55066 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.47□□□□□ -1.85
NcanP55066 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NcanP55066 Gm25404-201ENSMUST00000082970 107 ntBASIC3.47□□□□□ -1.85
NcanP55066 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm22970-201ENSMUST00000083304 186 ntBASIC3.47□□□□□ -1.85
NcanP55066 Gm8074-201ENSMUST00000095071 252 ntBASIC3.47□□□□□ -1.85
NcanP55066 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NcanP55066 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.47□□□□□ -1.85
NcanP55066 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NcanP55066 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
NcanP55066 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NcanP55066 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NcanP55066 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
NcanP55066 Gm25213-201ENSMUST00000102388 113 ntBASIC3.46□□□□□ -1.86
NcanP55066 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.46□□□□□ -1.86
NcanP55066 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm11229-201ENSMUST00000121993 437 ntBASIC3.46□□□□□ -1.86
NcanP55066 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm25153-201ENSMUST00000157118 156 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm22187-201ENSMUST00000157819 129 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm24819-201ENSMUST00000175094 166 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm27379-201ENSMUST00000183730 123 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm27535-201ENSMUST00000183814 157 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm19224-201ENSMUST00000190477 793 ntBASIC3.46□□□□□ -1.86
NcanP55066 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.46□□□□□ -1.86
NcanP55066 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC3.46□□□□□ -1.86
NcanP55066 Gm18000-201ENSMUST00000212153 800 ntBASIC3.46□□□□□ -1.86
NcanP55066 Gm18252-203ENSMUST00000215855 757 ntBASIC3.46□□□□□ -1.86
NcanP55066 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
NcanP55066 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.46□□□□□ -1.86
NcanP55066 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.46□□□□□ -1.86
NcanP55066 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
NcanP55066 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NcanP55066 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NcanP55066 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NcanP55066 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NcanP55066 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NcanP55066 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NcanP55066 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.45□□□□□ -1.86
NcanP55066 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NcanP55066 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NcanP55066 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NcanP55066 Mir592-201ENSMUST00000102113 96 ntBASIC3.45□□□□□ -1.86
NcanP55066 Mir190b-201ENSMUST00000104803 80 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm15176-201ENSMUST00000117734 135 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm24379-201ENSMUST00000122695 86 ntBASIC3.45□□□□□ -1.86
NcanP55066 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NcanP55066 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.45□□□□□ -1.86
NcanP55066 Gm23671-201ENSMUST00000157472 103 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm23592-201ENSMUST00000157859 117 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm23505-201ENSMUST00000158989 130 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NcanP55066 Gm22108-201ENSMUST00000177961 106 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm24798-201ENSMUST00000179334 106 ntBASIC3.45□□□□□ -1.86
NcanP55066 Mir6386-201ENSMUST00000183558 104 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm27580-201ENSMUST00000183666 149 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.45□□□□□ -1.86
NcanP55066 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.45□□□□□ -1.86
NcanP55066 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.45□□□□□ -1.86
NcanP55066 Gm43975-201ENSMUST00000203023 481 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm18691-201ENSMUST00000203593 872 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm44526-201ENSMUST00000204664 121 ntBASIC3.45□□□□□ -1.86
NcanP55066 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm44135-201ENSMUST00000205221 368 ntBASIC3.45□□□□□ -1.86
NcanP55066 Gm46136-201ENSMUST00000214730 565 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms