Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Sox3P53784 Gm8392-201ENSMUST00000185647 835 ntBASIC2.91□□□□□ -1.94
Sox3P53784 Gm28155-201ENSMUST00000191066 151 ntBASIC2.91□□□□□ -1.94
Sox3P53784 Gm37732-201ENSMUST00000194377 316 ntBASIC2.91□□□□□ -1.94
Sox3P53784 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.91□□□□□ -1.94
Sox3P53784 Gm44526-201ENSMUST00000204664 121 ntBASIC2.91□□□□□ -1.94
Sox3P53784 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.91□□□□□ -1.94
Sox3P53784 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Sox3P53784 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.91□□□□□ -1.94
Sox3P53784 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Sox3P53784 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Sox3P53784 Gm22782-201ENSMUST00000104082 132 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm24122-201ENSMUST00000104107 132 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Sox3P53784 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.9□□□□□ -1.95
Sox3P53784 Gm14537-201ENSMUST00000117464 599 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm13717-201ENSMUST00000119868 365 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm15244-201ENSMUST00000121122 130 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm12617-201ENSMUST00000121268 381 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.9□□□□□ -1.95
Sox3P53784 Gm14651-201ENSMUST00000147192 442 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm23473-201ENSMUST00000158883 116 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm17117-201ENSMUST00000163665 299 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Sox3P53784 Gm4761-201ENSMUST00000178086 582 ntBASIC2.9□□□□□ -1.95
Sox3P53784 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.9□□□□□ -1.95
Sox3P53784 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sox3P53784 Gm43899-201ENSMUST00000203675 246 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm18729-201ENSMUST00000217230 621 ntBASIC2.9□□□□□ -1.95
Sox3P53784 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Gm18026-201ENSMUST00000222789 727 ntBASIC2.9□□□□□ -1.95
Sox3P53784 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.9□□□□□ -1.95
Sox3P53784 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.9□□□□□ -1.95
Sox3P53784 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Sox3P53784 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Sox3P53784 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Sox3P53784 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Sox3P53784 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.9□□□□□ -1.95
Sox3P53784 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Sox3P53784 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.9□□□□□ -1.95
Sox3P53784 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sox3P53784 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox3P53784 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Sox3P53784 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Sox3P53784 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Sox3P53784 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sox3P53784 Mir467h-201ENSMUST00000116759 121 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm12656-201ENSMUST00000118149 577 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm14469-201ENSMUST00000118363 202 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm25341-201ENSMUST00000157461 268 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm22532-201ENSMUST00000158822 140 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.89□□□□□ -1.95
Sox3P53784 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox3P53784 Gm26960-201ENSMUST00000182263 412 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm28623-201ENSMUST00000187219 192 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm28917-201ENSMUST00000187294 237 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm28766-201ENSMUST00000191086 234 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Gm18892-201ENSMUST00000217628 881 ntBASIC2.89□□□□□ -1.95
Sox3P53784 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.89□□□□□ -1.95
Sox3P53784 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox3P53784 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox3P53784 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox3P53784 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox3P53784 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.89□□□□□ -1.95
Sox3P53784 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox3P53784 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
Sox3P53784 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm23691-201ENSMUST00000101878 107 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sox3P53784 Gm26423-201ENSMUST00000104277 128 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm14971-201ENSMUST00000117980 663 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm14669-201ENSMUST00000118841 250 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm8260-201ENSMUST00000119230 353 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sox3P53784 Gm11229-201ENSMUST00000121993 437 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm25808-201ENSMUST00000122784 284 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm14333-201ENSMUST00000130484 264 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm16274-201ENSMUST00000139251 592 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm22666-201ENSMUST00000158717 164 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm23505-201ENSMUST00000158989 130 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm27861-201ENSMUST00000183920 214 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm27428-201ENSMUST00000184289 110 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.88□□□□□ -1.95
Sox3P53784 Gm28466-201ENSMUST00000190678 659 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm29740-201ENSMUST00000193182 655 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.88□□□□□ -1.95
Sox3P53784 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm42828-201ENSMUST00000199669 469 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm46103-201ENSMUST00000217614 341 ntBASIC2.88□□□□□ -1.95
Sox3P53784 Gm9973-202ENSMUST00000220926 166 ntBASIC2.88□□□□□ -1.95
Sox3P53784 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms