Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm5538W4VSP6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm5538W4VSP6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Gm17661-201ENSMUST00000170317 270 ntBASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Odf3b-204ENSMUST00000227834 930 ntBASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm5538W4VSP6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm5538W4VSP6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.51■□□□□ 0.39
Gm5538W4VSP6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Gm37025-201ENSMUST00000195159 829 ntBASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Gm7791-201ENSMUST00000219066 539 ntBASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm5538W4VSP6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm5538W4VSP6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5538W4VSP6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5538W4VSP6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm5538W4VSP6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms