Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vstm4T1NXB5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Gm10849-201ENSMUST00000100397 618 ntBASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vstm4T1NXB5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Gm13148-201ENSMUST00000118892 745 ntBASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Gm11643-201ENSMUST00000119578 864 ntBASIC18.65■□□□□ 0.58
Vstm4T1NXB5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.65■□□□□ 0.58
Vstm4T1NXB5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vstm4T1NXB5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vstm4T1NXB5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.64■□□□□ 0.58
Vstm4T1NXB5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vstm4T1NXB5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Gm26571-201ENSMUST00000181399 666 ntBASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vstm4T1NXB5 Dancr-204ENSMUST00000132389 2347 ntBASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vstm4T1NXB5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms