Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.22□□□□□ -0.29
PdfS4R2K0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.22□□□□□ -0.29
PdfS4R2K0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
PdfS4R2K0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PdfS4R2K0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PdfS4R2K0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PdfS4R2K0 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.21□□□□□ -0.29
PdfS4R2K0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
PdfS4R2K0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.21□□□□□ -0.29
PdfS4R2K0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PdfS4R2K0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.21□□□□□ -0.29
PdfS4R2K0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Gm37179-201ENSMUST00000194862 823 ntBASIC13.21□□□□□ -0.29
PdfS4R2K0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PdfS4R2K0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PdfS4R2K0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PdfS4R2K0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PdfS4R2K0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Gm13146-201ENSMUST00000118508 780 ntBASIC13.2□□□□□ -0.3
PdfS4R2K0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PdfS4R2K0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PdfS4R2K0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Gm7514-201ENSMUST00000209475 934 ntBASIC13.19□□□□□ -0.3
PdfS4R2K0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
PdfS4R2K0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PdfS4R2K0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.19□□□□□ -0.3
PdfS4R2K0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms