Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb2S4R1M3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2afb2S4R1M3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H2afb2S4R1M3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2afb2S4R1M3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2afb2S4R1M3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2afb2S4R1M3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.17■□□□□ 0.34
H2afb2S4R1M3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
H2afb2S4R1M3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2afb2S4R1M3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms