Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Gm13148-201ENSMUST00000118892 745 ntBASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Haglr-201ENSMUST00000100000 2085 ntBASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H2afb1S4R1E0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2afb1S4R1E0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
H2afb1S4R1E0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Gm12933-201ENSMUST00000120203 872 ntBASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Gm5408-201ENSMUST00000197998 747 ntBASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
H2afb1S4R1E0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb1S4R1E0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb1S4R1E0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb1S4R1E0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
H2afb1S4R1E0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Gm11927-201ENSMUST00000118472 759 ntBASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
H2afb1S4R1E0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms