Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1h3Q9Z0Y9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1h3Q9Z0Y9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm9013-201ENSMUST00000132939 882 ntBASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm5587-201ENSMUST00000206270 674 ntBASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm9103-201ENSMUST00000119371 405 ntBASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1h3Q9Z0Y9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm7284-201ENSMUST00000131667 944 ntBASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm27741-201ENSMUST00000185060 237 ntBASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Gm7213-201ENSMUST00000215977 950 ntBASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1h3Q9Z0Y9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1h3Q9Z0Y9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1h3Q9Z0Y9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Ank2-226ENSMUST00000189368 339 ntBASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nr1h3Q9Z0Y9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.63■□□□□ 0.57
Nr1h3Q9Z0Y9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1h3Q9Z0Y9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms