Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cx3cr1Q9Z0D9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cx3cr1Q9Z0D9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.6□□□□□ -0.07
Cx3cr1Q9Z0D9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.59□□□□□ -0.07
Cx3cr1Q9Z0D9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cx3cr1Q9Z0D9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cx3cr1Q9Z0D9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm7514-201ENSMUST00000209475 934 ntBASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cx3cr1Q9Z0D9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cx3cr1Q9Z0D9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms