Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col13a1Q9R1N9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col13a1Q9R1N9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Col13a1Q9R1N9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Mir2861-201ENSMUST00000175539 82 ntBASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Gm7370-201ENSMUST00000219471 767 ntBASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col13a1Q9R1N9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col13a1Q9R1N9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col13a1Q9R1N9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms