Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Idnk-204ENSMUST00000226010 1898 ntBASIC15.25■□□□□ 0.03
Nubp2Q9R061 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nubp2Q9R061 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nubp2Q9R061 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.24■□□□□ 0.03
Nubp2Q9R061 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp2Q9R061 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.23■□□□□ 0.03
Nubp2Q9R061 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Mir6349-201ENSMUST00000184059 97 ntBASIC15.23■□□□□ 0.03
Nubp2Q9R061 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp2Q9R061 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.22■□□□□ 0.03
Nubp2Q9R061 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Gm715-201ENSMUST00000117865 831 ntBASIC15.22■□□□□ 0.03
Nubp2Q9R061 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nubp2Q9R061 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.21■□□□□ 0.03
Nubp2Q9R061 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Gm18025-201ENSMUST00000221733 862 ntBASIC15.21■□□□□ 0.03
Nubp2Q9R061 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp2Q9R061 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms