Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 Gm715-201ENSMUST00000117865 831 ntBASIC19.25■□□□□ 0.67
AmfrQ9R049 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.25■□□□□ 0.67
AmfrQ9R049 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
AmfrQ9R049 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AmfrQ9R049 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
AmfrQ9R049 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.24■□□□□ 0.67
AmfrQ9R049 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.24■□□□□ 0.67
AmfrQ9R049 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
AmfrQ9R049 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.24■□□□□ 0.67
AmfrQ9R049 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AmfrQ9R049 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
AmfrQ9R049 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.23■□□□□ 0.67
AmfrQ9R049 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
AmfrQ9R049 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
AmfrQ9R049 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.23■□□□□ 0.67
AmfrQ9R049 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
AmfrQ9R049 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
AmfrQ9R049 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AmfrQ9R049 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AmfrQ9R049 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.22■□□□□ 0.67
AmfrQ9R049 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.22■□□□□ 0.67
AmfrQ9R049 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Gm11643-201ENSMUST00000119578 864 ntBASIC19.22■□□□□ 0.67
AmfrQ9R049 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.22■□□□□ 0.67
AmfrQ9R049 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
AmfrQ9R049 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AmfrQ9R049 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.22■□□□□ 0.67
AmfrQ9R049 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AmfrQ9R049 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AmfrQ9R049 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
AmfrQ9R049 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.21■□□□□ 0.67
AmfrQ9R049 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
AmfrQ9R049 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AmfrQ9R049 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.2■□□□□ 0.66
AmfrQ9R049 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms