Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Herpud1Q9JJK5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Mir6349-201ENSMUST00000184059 97 ntBASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Herpud1Q9JJK5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Herpud1Q9JJK5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Gm10138-203ENSMUST00000206952 366 ntBASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Herpud1Q9JJK5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herpud1Q9JJK5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Gm11643-201ENSMUST00000119578 864 ntBASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herpud1Q9JJK5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms