Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacna1fQ9JIS7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Gm43347-201ENSMUST00000200226 580 ntBASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacna1fQ9JIS7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacna1fQ9JIS7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 AW822252-206ENSMUST00000208904 237 ntBASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cacna1fQ9JIS7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Mir5126-201ENSMUST00000175513 77 ntBASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cacna1fQ9JIS7 Gm12644-201ENSMUST00000119935 606 ntBASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Gm18733-201ENSMUST00000173950 856 ntBASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Gm12895-201ENSMUST00000122214 226 ntBASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cacna1fQ9JIS7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44357-201ENSMUST00000195897 142 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm19658-201ENSMUST00000196231 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44367-201ENSMUST00000196836 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44350-201ENSMUST00000197197 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44390-201ENSMUST00000197533 144 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44313-201ENSMUST00000198018 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44486-201ENSMUST00000198508 138 ntBASIC19.49■□□□□ 0.71
Cacna1fQ9JIS7 Gm44454-201ENSMUST00000198541 138 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms