Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ube3bQ9ES34 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Ube3bQ9ES34 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ube3bQ9ES34 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Gm26039-201ENSMUST00000158152 144 ntBASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Rarb-207ENSMUST00000225921 2756 ntBASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ube3bQ9ES34 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ube3bQ9ES34 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 AA414768-201ENSMUST00000121924 1257 ntBASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.4■□□□□ 0.86
Ube3bQ9ES34 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ube3bQ9ES34 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ube3bQ9ES34 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ube3bQ9ES34 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ube3bQ9ES34 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.39■□□□□ 0.85
Ube3bQ9ES34 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms