Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lime1Q9EQR5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Gm11249-201ENSMUST00000117071 859 ntBASIC14.97□□□□□ -0.01
Lime1Q9EQR5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Gm8495-201ENSMUST00000188740 694 ntBASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lime1Q9EQR5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.96□□□□□ -0.01
Lime1Q9EQR5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lime1Q9EQR5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lime1Q9EQR5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lime1Q9EQR5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lime1Q9EQR5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms