Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cldn22Q9D7U6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cldn22Q9D7U6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cldn22Q9D7U6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn22Q9D7U6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn22Q9D7U6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn22Q9D7U6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.27■□□□□ 0.35
Cldn22Q9D7U6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn22Q9D7U6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Cldn22Q9D7U6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cldn22Q9D7U6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Gm43799-201ENSMUST00000201845 579 ntBASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn22Q9D7U6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms