Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rpap3Q9D706 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.95■□□□□ 0.62
Rpap3Q9D706 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpap3Q9D706 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.94■□□□□ 0.62
Rpap3Q9D706 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Gm27000-201ENSMUST00000182943 842 ntBASIC18.94■□□□□ 0.62
Rpap3Q9D706 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rpap3Q9D706 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.94■□□□□ 0.62
Rpap3Q9D706 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpap3Q9D706 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rpap3Q9D706 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.92■□□□□ 0.62
Rpap3Q9D706 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.92■□□□□ 0.62
Rpap3Q9D706 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpap3Q9D706 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.92■□□□□ 0.62
Rpap3Q9D706 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpap3Q9D706 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpap3Q9D706 Gm14859-201ENSMUST00000117752 357 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms