Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd1Q9D0E3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd1Q9D0E3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Gm11780-201ENSMUST00000136880 516 ntBASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd1Q9D0E3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd1Q9D0E3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd1Q9D0E3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd1Q9D0E3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd1Q9D0E3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
Lysmd1Q9D0E3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd1Q9D0E3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Lysmd1Q9D0E3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd1Q9D0E3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd1Q9D0E3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms